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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.3.1/jquery.min.js"></script>
<title>Sandbox</title>
<meta http-equiv="Content-type" content="text/html; charset=utf-8" />
</head>
<body>
  <div style="height:700px;width:100%;" id = "top">
   <input id="test" value="Scroll To Anchor" />
   </div>
  <div style="height:700px;width:100%;" id = "bottom">
    <span id="testlink" href="#test">Test Link</span>
  </div>
<script type="text/javascript">
$(function(){
    var t = 0;
    setInterval(function() {
        
      if (t==0) {
          $('html, body').animate({ scrollTop: $('#bottom').offset().top },300);
          t=1;
        } else if (t) {
          $('html, body').animate({ scrollTop: 0 },300);
            t=0
        }
    }, 5000);
});
</script>
</body>
</html>
Output

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